Design References
| Organism Name | Scientific Name | Assembly Version | Assembly Release Date | Number of Contigs | Size | Gene Annotation Sources | Variant Sources | Reference Downloads |
|---|---|---|---|---|---|---|---|---|
| Human | Homo sapiens | hg19 | Feb. 2009 | 24 chromosomes | 3.10 Gb | UCSC | dbSNP v138, COSMIC v86 | sequence (FASTA) |
| Human | Homo sapiens | hg38 | Dec. 2013 | 24 chromosomes, 1 alt contig | 3.13 Gb | UCSC | dbSNP v146, COSMIC v86 | sequence (FASTA) |
| Mouse | Mus musculus | mm10 | Dec. 2011 | 21 chromosomes | 2.72 Gb | UCSC | dbSNP v138 | sequence (FASTA) |
| Chicken | Gallus gallus | galGal4 | Nov. 2011 | 31 chromosomes, 1 scaffold | 1.00 Gb | dbSNP v138 | sequence (FASTA) | |
| Cow | Bos taurus | bosTau7 | Oct. 2011 | 31 chromosomes, 11,660 scaffolds | 2.98 Gb | dbSNP v138 | sequence (FASTA) | |
| Pig | Sus scrofa | susScr3 | Aug. 2011 | 20 chromosomes, 4,417 scaffolds | 2.81 Gb | dbSNP v138 | sequence (FASTA) | |
| Sheep | Ovis aries | oviAri3 | Aug. 2012 | 27 chromosomes, 5,670 scaffolds | 2.62 Gb | sequence (FASTA) | ||
| Chinese hamster | Cricetulus griseus | criGri1 | Jul. 2013 | 52,710 scaffolds | 2.36 Gb | sequence (FASTA) | ||
| Dog | Canis lupus familiaris | canFam3 | Sep. 2011 | 39 chromosomes, 3,228 scaffolds | 2.41 Gb | sequence (FASTA) | ||
| Maize | Zea mays | AGPv3 | Apr. 2013 | 10 chromosomes, 493 scaffolds | 2.07 Gb | Ensembl | sequence (FASTA) | |
| Rice | Oryza sativa | IRGSP-1.0 | Oct. 2011 | 12 chromosomes, 49 scaffolds | 374.42 Mb | Ensembl | sequence (FASTA) | |
| Soybean | Glycine max | Glyma 1.1 | Jan. 2010 | 20 chromosomes, 1,148 scaffolds | 973.34 Mb | Ensembl | sequence (FASTA) | |
| Tomato | Solanum lycopersicum | SL 2.40 | Apr. 2011 | 13 chromosomes | 781.67 Mb | sequence (FASTA) |